Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ndufb11O09111 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Ndufb11O09111 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ndufb11O09111 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ndufb11O09111 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Ndufb11O09111 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ndufb11O09111 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ndufb11O09111 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ndufb11O09111 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm2274-201ENSMUST00000184539 609 ntBASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.19□□□□□ -0.62
Ndufb11O09111 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.19□□□□□ -0.62
Ndufb11O09111 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ndufb11O09111 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.19□□□□□ -0.62
Ndufb11O09111 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Ndufb11O09111 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.19□□□□□ -0.62
Ndufb11O09111 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ndufb11O09111 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.18□□□□□ -0.62
Ndufb11O09111 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms