Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Gm24589-201ENSMUST00000116692 94 ntBASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gm5479-201ENSMUST00000160578 435 ntBASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shisa8J3QNX5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm2272-201ENSMUST00000194903 582 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm15590-201ENSMUST00000078419 552 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa8J3QNX5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms