Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Carlr-201ENSMUST00000181515 2574 ntBASIC12.91□□□□□ -0.34
TprF6ZDS4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
TprF6ZDS4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TprF6ZDS4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.91□□□□□ -0.34
TprF6ZDS4 Mir1894-201ENSMUST00000122802 81 ntBASIC12.91□□□□□ -0.34
TprF6ZDS4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Gm22334-201ENSMUST00000158070 133 ntBASIC12.91□□□□□ -0.34
TprF6ZDS4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Efs-202ENSMUST00000227037 2540 ntBASIC12.91□□□□□ -0.34
TprF6ZDS4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TprF6ZDS4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TprF6ZDS4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Gm11628-201ENSMUST00000117568 171 ntBASIC12.9□□□□□ -0.34
TprF6ZDS4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Gm9726-201ENSMUST00000180321 678 ntBASIC12.9□□□□□ -0.34
TprF6ZDS4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.9□□□□□ -0.34
TprF6ZDS4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.9□□□□□ -0.34
TprF6ZDS4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Rps4l-202ENSMUST00000204242 789 ntBASIC12.9□□□□□ -0.34
TprF6ZDS4 Gm6916-202ENSMUST00000205523 195 ntBASIC12.9□□□□□ -0.34
TprF6ZDS4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TprF6ZDS4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TprF6ZDS4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TprF6ZDS4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
TprF6ZDS4 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.89□□□□□ -0.35
TprF6ZDS4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.89□□□□□ -0.35
TprF6ZDS4 Gm43758-201ENSMUST00000199500 367 ntBASIC12.89□□□□□ -0.35
TprF6ZDS4 Gm17795-201ENSMUST00000214505 757 ntBASIC12.89□□□□□ -0.35
TprF6ZDS4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.89□□□□□ -0.35
TprF6ZDS4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.89□□□□□ -0.35
TprF6ZDS4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TprF6ZDS4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms