Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.45□□□□□ -0.1
Atf6F6VAN0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atf6F6VAN0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Gm5566-201ENSMUST00000116118 459 ntBASIC14.44□□□□□ -0.1
Atf6F6VAN0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Gm26308-201ENSMUST00000157768 69 ntBASIC14.44□□□□□ -0.1
Atf6F6VAN0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf6F6VAN0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Mir449b-201ENSMUST00000104833 80 ntBASIC14.43□□□□□ -0.1
Atf6F6VAN0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Gm44608-201ENSMUST00000206827 855 ntBASIC14.43□□□□□ -0.1
Atf6F6VAN0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6F6VAN0 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms