Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm2517-201ENSMUST00000215651 348 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm18027-201ENSMUST00000218947 619 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 AC113031.8-201ENSMUST00000227856 631 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm6781-201ENSMUST00000038304 1242 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm13384-201ENSMUST00000117166 1344 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm12380-201ENSMUST00000119012 544 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm2546-201ENSMUST00000182630 991 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 CT009713.8-201ENSMUST00000225448 560 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm20414-201ENSMUST00000172918 646 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm9132-201ENSMUST00000210182 832 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 AC137950.2-202ENSMUST00000227150 1635 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm1848-201ENSMUST00000120711 789 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm3329-201ENSMUST00000159873 556 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm18463-201ENSMUST00000207258 474 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm18460-201ENSMUST00000208088 464 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm15784-201ENSMUST00000120260 1462 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Gm45135-201ENSMUST00000206787 1184 ntBASIC7.63□□□□□ -1.19
Herc1E9PZP8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Herc1E9PZP8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm12882-201ENSMUST00000121696 517 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm28693-202ENSMUST00000190758 331 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm4482-201ENSMUST00000200876 742 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm13859-201ENSMUST00000119936 1423 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms