Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Gm15240-201ENSMUST00000118156 720 ntBASIC12.58□□□□□ -0.4
Shank1D3YZU1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Gm18905-201ENSMUST00000205454 928 ntBASIC12.58□□□□□ -0.4
Shank1D3YZU1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.58□□□□□ -0.4
Shank1D3YZU1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.58□□□□□ -0.4
Shank1D3YZU1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shank1D3YZU1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm12928-201ENSMUST00000117115 573 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm5187-201ENSMUST00000117317 991 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm27572-201ENSMUST00000183702 255 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm27847-201ENSMUST00000183711 107 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm27375-201ENSMUST00000183799 107 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm15236-201ENSMUST00000117309 379 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.57□□□□□ -0.4
Shank1D3YZU1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shank1D3YZU1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Gm13350-201ENSMUST00000120519 479 ntBASIC12.56□□□□□ -0.4
Shank1D3YZU1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms