Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap99A0A140LIX9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Gm12138-201ENSMUST00000122180 951 ntBASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Gm37917-201ENSMUST00000194711 392 ntBASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.81■□□□□ 0.28
Cfap99A0A140LIX9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cfap99A0A140LIX9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap99A0A140LIX9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Gm28760-201ENSMUST00000185995 736 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms