Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.52□□□□□ -0.57
Trav18A0A075B656 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.52□□□□□ -0.57
Trav18A0A075B656 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav18A0A075B656 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.51□□□□□ -0.57
Trav18A0A075B656 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gm12882-201ENSMUST00000121696 517 ntBASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.51□□□□□ -0.57
Trav18A0A075B656 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav18A0A075B656 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.5□□□□□ -0.57
Trav18A0A075B656 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.5□□□□□ -0.57
Trav18A0A075B656 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav18A0A075B656 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms