Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm44454-201ENSMUST00000198541 138 ntBASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm17808-201ENSMUST00000200859 894 ntBASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav8-1A0A075B641 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Gm18622-201ENSMUST00000219361 595 ntBASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms