Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Mir6982-201ENSMUST00000184354 68 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.61□□□□□ -0.71
Trav7n-4A0A075B620 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav7n-4A0A075B620 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms