Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Gm15806-201ENSMUST00000120696 955 ntBASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcb1Q9Z0H3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcb1Q9Z0H3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm12138-201ENSMUST00000122180 951 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm28911-201ENSMUST00000188837 117 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm18187-201ENSMUST00000196476 984 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms