Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cx3cr1Q9Z0D9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cx3cr1Q9Z0D9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm5479-201ENSMUST00000160578 435 ntBASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Birc2-201ENSMUST00000054878 378 ntBASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.91□□□□□ -0.5
Cx3cr1Q9Z0D9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms