Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm10253-201ENSMUST00000194270 940 ntBASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm8396-201ENSMUST00000057361 823 ntBASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClcnkaQ9WUB7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gm14701-201ENSMUST00000117156 348 ntBASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gm7774-201ENSMUST00000200064 533 ntBASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClcnkaQ9WUB7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Mir449b-201ENSMUST00000104833 80 ntBASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Gm13823-201ENSMUST00000119930 345 ntBASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms