Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3aQ9JKX8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3aQ9JKX8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3aQ9JKX8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Gm14719-201ENSMUST00000121891 340 ntBASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Gm27838-201ENSMUST00000184829 128 ntBASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Gm29667-201ENSMUST00000190817 490 ntBASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3aQ9JKX8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms