Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Gm37259-201ENSMUST00000193903 849 ntBASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Gm10146-201ENSMUST00000072739 309 ntBASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1fQ9JIS7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Gm1335-201ENSMUST00000121653 386 ntBASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.74■□□□□ 0.11
Cacna1fQ9JIS7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm38341-201ENSMUST00000195357 515 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm45930-201ENSMUST00000221330 292 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm13350-201ENSMUST00000120519 479 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1fQ9JIS7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1fQ9JIS7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1fQ9JIS7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms