Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Mir6392-201ENSMUST00000184924 108 ntBASIC16.69■□□□□ 0.26
Ube3bQ9ES34 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Gm6180-201ENSMUST00000065243 498 ntBASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ube3bQ9ES34 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.69■□□□□ 0.26
Ube3bQ9ES34 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Gm43371-201ENSMUST00000202838 1031 ntBASIC16.68■□□□□ 0.26
Ube3bQ9ES34 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.68■□□□□ 0.26
Ube3bQ9ES34 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube3bQ9ES34 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Gm12341-201ENSMUST00000119724 503 ntBASIC16.67■□□□□ 0.26
Ube3bQ9ES34 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Gm8515-201ENSMUST00000194852 576 ntBASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube3bQ9ES34 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Gm23984-201ENSMUST00000157139 203 ntBASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms