Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube4bQ9ES00 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube4bQ9ES00 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube4bQ9ES00 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube4bQ9ES00 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Ube4bQ9ES00 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ube4bQ9ES00 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Gm28033-201ENSMUST00000184224 96 ntBASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube4bQ9ES00 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Gm8584-201ENSMUST00000171982 758 ntBASIC13.5□□□□□ -0.25
Ube4bQ9ES00 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.5□□□□□ -0.25
Ube4bQ9ES00 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms