Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm11524-201ENSMUST00000119349 807 ntBASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm19078-201ENSMUST00000206311 727 ntBASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rrp8Q9DB85 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rrp8Q9DB85 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm12928-201ENSMUST00000117115 573 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm13385-201ENSMUST00000121089 220 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.73□□□□□ -0.21
Rrp8Q9DB85 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.72□□□□□ -0.21
Rrp8Q9DB85 Gm11814-201ENSMUST00000119515 929 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms