Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp4bQ9D8B3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Gm15653-201ENSMUST00000119247 907 ntBASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Gm26308-201ENSMUST00000157768 69 ntBASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Gm16476-201ENSMUST00000221544 139 ntBASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp4bQ9D8B3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm24543-201ENSMUST00000103867 82 ntBASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Dupd1-202ENSMUST00000224735 548 ntBASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp4bQ9D8B3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm25144-201ENSMUST00000179561 110 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm25352-201ENSMUST00000179815 110 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm27430-201ENSMUST00000184585 107 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Gm44333-201ENSMUST00000197168 107 ntBASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp4bQ9D8B3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms