Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Gm10819-201ENSMUST00000099988 561 ntBASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Gm12882-201ENSMUST00000121696 517 ntBASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp5Q9D7S9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp5Q9D7S9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.58■□□□□ 0.41
Chmp5Q9D7S9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp5Q9D7S9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp5Q9D7S9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Chmp5Q9D7S9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp5Q9D7S9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp5Q9D7S9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms