Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1aQ9D132 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1aQ9D132 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1aQ9D132 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1aQ9D132 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1aQ9D132 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.33□□□□□ -0.28
Upk1aQ9D132 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.33□□□□□ -0.28
Upk1aQ9D132 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Gm9385-201ENSMUST00000117563 472 ntBASIC13.33□□□□□ -0.28
Upk1aQ9D132 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Gm27301-201ENSMUST00000184012 127 ntBASIC13.33□□□□□ -0.28
Upk1aQ9D132 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.33□□□□□ -0.28
Upk1aQ9D132 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1aQ9D132 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm2445-201ENSMUST00000182798 989 ntBASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm17968-201ENSMUST00000194902 784 ntBASIC13.32□□□□□ -0.28
Upk1aQ9D132 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.32□□□□□ -0.28
Upk1aQ9D132 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk1aQ9D132 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Gm7461-201ENSMUST00000058918 827 ntBASIC13.31□□□□□ -0.28
Upk1aQ9D132 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk1aQ9D132 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms