Protein–RNA interactions for Protein: Q9CY57

Chtop, Chromatin target of PRMT1 protein, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChtopQ9CY57 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.85□□□□□ -0.67
ChtopQ9CY57 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.85□□□□□ -0.67
ChtopQ9CY57 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ChtopQ9CY57 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.84□□□□□ -0.67
ChtopQ9CY57 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gm27867-201ENSMUST00000184778 125 ntBASIC10.84□□□□□ -0.67
ChtopQ9CY57 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.84□□□□□ -0.67
ChtopQ9CY57 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.84□□□□□ -0.67
ChtopQ9CY57 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.84□□□□□ -0.67
ChtopQ9CY57 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.84□□□□□ -0.67
ChtopQ9CY57 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ChtopQ9CY57 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.83□□□□□ -0.67
ChtopQ9CY57 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
ChtopQ9CY57 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms