Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm1401-201ENSMUST00000122048 772 ntBASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm44492-201ENSMUST00000197012 141 ntBASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr1Q9CY50 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.29■□□□□ 0.04
Ssr1Q9CY50 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ssr1Q9CY50 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Gm43868-201ENSMUST00000205187 2114 ntBASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms