Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Gm7488-201ENSMUST00000117148 684 ntBASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.32□□□□□ -0.28
Otud1Q9CUB6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Otud1Q9CUB6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gm22189-201ENSMUST00000103822 86 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gm21470-201ENSMUST00000187680 696 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gm6546-201ENSMUST00000192096 766 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gm37714-201ENSMUST00000194742 342 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otud1Q9CUB6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Gm21854-201ENSMUST00000179901 471 ntBASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Gm10766-202ENSMUST00000194123 606 ntBASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Gm37720-201ENSMUST00000195497 1241 ntBASIC13.3□□□□□ -0.28
Otud1Q9CUB6 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Gm18027-201ENSMUST00000218947 619 ntBASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms