Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Gm45841-201ENSMUST00000207700 164 ntBASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim34aQ99PP6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Gm15371-201ENSMUST00000117057 784 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Gm13689-201ENSMUST00000119360 685 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim34aQ99PP6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Gm6983-201ENSMUST00000214912 628 ntBASIC17.27■□□□□ 0.36
Trim34aQ99PP6 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim34aQ99PP6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim34aQ99PP6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim34aQ99PP6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Trim34aQ99PP6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Gm12957-201ENSMUST00000117835 377 ntBASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Gm13226-201ENSMUST00000117838 404 ntBASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Gm8652-201ENSMUST00000181363 964 ntBASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Gm6007-201ENSMUST00000208170 823 ntBASIC17.26■□□□□ 0.35
Trim34aQ99PP6 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.26■□□□□ 0.35
Trim34aQ99PP6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms