Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Gm45747-201ENSMUST00000212203 999 ntBASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim8Q99PJ2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.79□□□□□ -0.2
Trim8Q99PJ2 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Psmb5-202ENSMUST00000227257 622 ntBASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim8Q99PJ2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms