Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Gm24548-201ENSMUST00000158650 108 ntBASIC14.03□□□□□ -0.16
Cdh23Q99PF4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Gm14208-201ENSMUST00000119645 678 ntBASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Gm10752-201ENSMUST00000218348 729 ntBASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh23Q99PF4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Gm24420-201ENSMUST00000176676 59 ntBASIC14.02□□□□□ -0.16
Cdh23Q99PF4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh23Q99PF4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Gm3508-201ENSMUST00000186012 792 ntBASIC14.02□□□□□ -0.17
Cdh23Q99PF4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Gm14130-201ENSMUST00000118417 987 ntBASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh23Q99PF4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Gm12217-201ENSMUST00000118858 696 ntBASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Gm11628-201ENSMUST00000117568 171 ntBASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Gm44100-201ENSMUST00000204329 436 ntBASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms