Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Raf1Q99N57 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.67□□□□□ -0.38
Raf1Q99N57 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.67□□□□□ -0.38
Raf1Q99N57 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 AA543401-201ENSMUST00000164248 1269 ntBASIC12.67□□□□□ -0.38
Raf1Q99N57 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.67□□□□□ -0.38
Raf1Q99N57 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.67□□□□□ -0.38
Raf1Q99N57 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Raf1Q99N57 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.66□□□□□ -0.38
Raf1Q99N57 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Gm27321-201ENSMUST00000185021 205 ntBASIC12.66□□□□□ -0.38
Raf1Q99N57 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.66□□□□□ -0.38
Raf1Q99N57 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.66□□□□□ -0.38
Raf1Q99N57 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Raf1Q99N57 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Raf1Q99N57 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.65□□□□□ -0.38
Raf1Q99N57 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.65□□□□□ -0.38
Raf1Q99N57 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Raf1Q99N57 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms