Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm14660-201ENSMUST00000119809 575 ntBASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm29649-201ENSMUST00000185649 419 ntBASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm44397-201ENSMUST00000195950 113 ntBASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Gm27731-201ENSMUST00000185192 107 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Gm38223-201ENSMUST00000194484 695 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Gm38671-201ENSMUST00000200573 130 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smarcd2Q99JR8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Gm8062-201ENSMUST00000139696 444 ntBASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Gm10012-201ENSMUST00000078252 192 ntBASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd2Q99JR8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms