Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b3Q921M3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sf3b3Q921M3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b3Q921M3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b3Q921M3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b3Q921M3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Gm12384-201ENSMUST00000119228 919 ntBASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Gm22331-201ENSMUST00000158066 136 ntBASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Proscos-202ENSMUST00000178990 666 ntBASIC16.81■□□□□ 0.28
Sf3b3Q921M3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.81■□□□□ 0.28
Sf3b3Q921M3 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b3Q921M3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm16177-201ENSMUST00000120728 718 ntBASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm6152-201ENSMUST00000151704 340 ntBASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm8584-201ENSMUST00000171982 758 ntBASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b3Q921M3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Gm10156-201ENSMUST00000122364 462 ntBASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Gm17420-201ENSMUST00000164753 153 ntBASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b3Q921M3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3b3Q921M3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Sf3b3Q921M3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3b3Q921M3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms