Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb3Q91XZ7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhb3Q91XZ7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm9682-201ENSMUST00000197505 556 ntBASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm18041-201ENSMUST00000218210 618 ntBASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb3Q91XZ7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms