Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm13464-201ENSMUST00000119418 935 ntBASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm2451-201ENSMUST00000199447 999 ntBASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm10290-201ENSMUST00000200451 999 ntBASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm43630-201ENSMUST00000201550 776 ntBASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Gm15824-201ENSMUST00000119516 955 ntBASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Gm17150-201ENSMUST00000165577 381 ntBASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Mir6392-201ENSMUST00000184924 108 ntBASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.04■□□□□ 0.16
Pcdhgc5Q91XW9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc5Q91XW9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc5Q91XW9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc5Q91XW9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc5Q91XW9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhgc5Q91XW9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms