Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.11□□□□□ -0.47
Tram1Q91V04 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Gm5682-201ENSMUST00000173402 505 ntBASIC12.11□□□□□ -0.47
Tram1Q91V04 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Gm27704-201ENSMUST00000185094 107 ntBASIC12.11□□□□□ -0.47
Tram1Q91V04 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.11□□□□□ -0.47
Tram1Q91V04 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tram1Q91V04 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tram1Q91V04 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.1□□□□□ -0.47
Tram1Q91V04 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tram1Q91V04 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.1□□□□□ -0.47
Tram1Q91V04 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Gm6659-201ENSMUST00000174752 547 ntBASIC12.1□□□□□ -0.47
Tram1Q91V04 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.1□□□□□ -0.47
Tram1Q91V04 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.1□□□□□ -0.47
Tram1Q91V04 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.1□□□□□ -0.47
Tram1Q91V04 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.1□□□□□ -0.47
Tram1Q91V04 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Tram1Q91V04 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tram1Q91V04 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tram1Q91V04 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm2272-201ENSMUST00000194903 582 ntBASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm45098-201ENSMUST00000207179 657 ntBASIC12.09□□□□□ -0.47
Tram1Q91V04 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms