Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Gm18057-201ENSMUST00000208220 503 ntBASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.6□□□□□ -0.23
Rnf8Q8VC56 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm13464-201ENSMUST00000119418 935 ntBASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Chchd1-203ENSMUST00000224633 557 ntBASIC13.59□□□□□ -0.23
Rnf8Q8VC56 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rnf8Q8VC56 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rnf8Q8VC56 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf8Q8VC56 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Rnf8Q8VC56 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf8Q8VC56 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf8Q8VC56 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm23935-201ENSMUST00000102303 57 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm24270-201ENSMUST00000102326 57 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm15483-201ENSMUST00000120338 456 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm24245-201ENSMUST00000157318 57 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf8Q8VC56 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms