Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nudcd3Q8R1N4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nudcd3Q8R1N4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm10275-201ENSMUST00000092620 635 ntBASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Grk6-205ENSMUST00000224653 2976 ntBASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nudcd3Q8R1N4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Gm24589-201ENSMUST00000116692 94 ntBASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd3Q8R1N4 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Gm13597-201ENSMUST00000121239 375 ntBASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Gm11452-201ENSMUST00000122376 690 ntBASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd3Q8R1N4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nudcd3Q8R1N4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms