Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.06■□□□□ 0
Rpp40Q8R1F9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.06■□□□□ 0
Rpp40Q8R1F9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpp40Q8R1F9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rpp40Q8R1F9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rpp40Q8R1F9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpp40Q8R1F9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rpp40Q8R1F9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Rpp40Q8R1F9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Rpp40Q8R1F9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.05■□□□□ -0
Rpp40Q8R1F9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpp40Q8R1F9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.04■□□□□ -0
Rpp40Q8R1F9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.04■□□□□ -0
Rpp40Q8R1F9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Gm28760-201ENSMUST00000185995 736 ntBASIC15.04■□□□□ -0
Rpp40Q8R1F9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.04■□□□□ -0
Rpp40Q8R1F9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.04■□□□□ -0
Rpp40Q8R1F9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms