Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc87Q8CDL9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc87Q8CDL9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc87Q8CDL9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc87Q8CDL9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc87Q8CDL9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gm11025-201ENSMUST00000140773 466 ntBASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc87Q8CDL9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms