Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Alx1Q8C8B0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Alx1Q8C8B0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Alx1Q8C8B0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Alx1Q8C8B0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Gm5279-201ENSMUST00000199575 745 ntBASIC16.39■□□□□ 0.21
Alx1Q8C8B0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.39■□□□□ 0.21
Alx1Q8C8B0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx1Q8C8B0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alx1Q8C8B0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx1Q8C8B0 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.36■□□□□ 0.21
Alx1Q8C8B0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx1Q8C8B0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx1Q8C8B0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx1Q8C8B0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms