Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Gm22175-201ENSMUST00000175007 78 ntBASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Gm27618-201ENSMUST00000183671 60 ntBASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim9Q8C7M3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Gm27430-201ENSMUST00000184585 107 ntBASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Gm38294-201ENSMUST00000192831 381 ntBASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Gm44333-201ENSMUST00000197168 107 ntBASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim9Q8C7M3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.52■□□□□ 0.08
Trim9Q8C7M3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim9Q8C7M3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Gm2445-201ENSMUST00000182798 989 ntBASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim9Q8C7M3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms