Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.41■□□□□ 0.06
Lin9Q8C735 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Lin9Q8C735 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lin9Q8C735 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Lin9Q8C735 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.4■□□□□ 0.06
Lin9Q8C735 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lin9Q8C735 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.39■□□□□ 0.05
Lin9Q8C735 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lin9Q8C735 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.38■□□□□ 0.05
Lin9Q8C735 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.38■□□□□ 0.05
Lin9Q8C735 Gm5745-201ENSMUST00000183748 313 ntBASIC15.38■□□□□ 0.05
Lin9Q8C735 Gm44344-201ENSMUST00000200287 129 ntBASIC15.38■□□□□ 0.05
Lin9Q8C735 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lin9Q8C735 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.38■□□□□ 0.05
Lin9Q8C735 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
Lin9Q8C735 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Lin9Q8C735 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Lin9Q8C735 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms