Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a6Q8C6K9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gm12485-201ENSMUST00000119641 291 ntBASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.65□□□□□ -0.38
Col6a6Q8C6K9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a6Q8C6K9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a6Q8C6K9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a6Q8C6K9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a6Q8C6K9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms