Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smim4Q8C1Q6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm12882-201ENSMUST00000121696 517 ntBASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim4Q8C1Q6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms