Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Gm6415-201ENSMUST00000118488 348 ntBASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Gm9719-201ENSMUST00000162765 543 ntBASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Gm8584-201ENSMUST00000171982 758 ntBASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Gm45453-201ENSMUST00000211758 853 ntBASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Gm38294-201ENSMUST00000192831 381 ntBASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf3Q8C120 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Gm5566-201ENSMUST00000116118 459 ntBASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sh3rf3Q8C120 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms