Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Gm14494-201ENSMUST00000118786 435 ntBASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam43aQ8BUP8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Gm4995-201ENSMUST00000117247 432 ntBASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Gm15467-201ENSMUST00000120582 445 ntBASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Gm5177-201ENSMUST00000183092 997 ntBASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam43aQ8BUP8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam43aQ8BUP8 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Gm12008-201ENSMUST00000117791 755 ntBASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam43aQ8BUP8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam43aQ8BUP8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms