Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm2423-201ENSMUST00000074863 733 ntBASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup54Q8BTS4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Gm44855-201ENSMUST00000205725 362 ntBASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Gm5425-201ENSMUST00000214125 459 ntBASIC14.38□□□□□ -0.11
Nup54Q8BTS4 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.38□□□□□ -0.11
Nup54Q8BTS4 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup54Q8BTS4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms