Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm6659-201ENSMUST00000174752 547 ntBASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm37153-201ENSMUST00000193637 231 ntBASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.58□□□□□ -0.55
Smco3Q8BQM7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm7284-201ENSMUST00000131667 944 ntBASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco3Q8BQM7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms