Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.66□□□□□ -0.54
Smg1Q8BKX6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smg1Q8BKX6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smg1Q8BKX6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smg1Q8BKX6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smg1Q8BKX6 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.66□□□□□ -0.54
Smg1Q8BKX6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm10608-202ENSMUST00000213924 676 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm13813-201ENSMUST00000120998 787 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm12485-201ENSMUST00000119641 291 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm14277-201ENSMUST00000121195 360 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Gm45770-201ENSMUST00000212105 616 ntBASIC11.65□□□□□ -0.54
Smg1Q8BKX6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smg1Q8BKX6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smg1Q8BKX6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smg1Q8BKX6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smg1Q8BKX6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smg1Q8BKX6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gm15371-201ENSMUST00000117057 784 ntBASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gm44551-201ENSMUST00000208804 171 ntBASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gm14028-201ENSMUST00000117434 479 ntBASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.64□□□□□ -0.55
Smg1Q8BKX6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.63□□□□□ -0.55
Smg1Q8BKX6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms