Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Rpph1-201ENSMUST00000175096 319 ntBASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2bQ8BJF9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms