Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Depdc1bQ8BH88 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.34■□□□□ 0.05
Depdc1bQ8BH88 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.34■□□□□ 0.05
Depdc1bQ8BH88 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Depdc1bQ8BH88 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Depdc1bQ8BH88 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Depdc1bQ8BH88 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Depdc1bQ8BH88 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Depdc1bQ8BH88 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Depdc1bQ8BH88 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Gm18049-201ENSMUST00000208909 581 ntBASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Depdc1bQ8BH88 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Depdc1bQ8BH88 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Depdc1bQ8BH88 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gm8410-201ENSMUST00000117225 605 ntBASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gm27618-201ENSMUST00000183671 60 ntBASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms