Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.53■□□□□ 0.24
Samm50Q8BGH2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm25287-201ENSMUST00000103846 110 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm22918-201ENSMUST00000103855 110 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Mir449b-201ENSMUST00000104833 80 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm13616-201ENSMUST00000120600 222 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm25925-201ENSMUST00000158314 306 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm10253-201ENSMUST00000194270 940 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Olfr286-202ENSMUST00000205305 969 ntBASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Samm50Q8BGH2 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.52■□□□□ 0.23
Samm50Q8BGH2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Samm50Q8BGH2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Samm50Q8BGH2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Samm50Q8BGH2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Samm50Q8BGH2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.52■□□□□ 0.23
Samm50Q8BGH2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm22065-201ENSMUST00000103753 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm22066-201ENSMUST00000103761 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24932-201ENSMUST00000103763 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24115-201ENSMUST00000103799 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm22190-201ENSMUST00000103827 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm22191-201ENSMUST00000103831 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24721-201ENSMUST00000103849 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm28018-201ENSMUST00000103869 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm26399-201ENSMUST00000103937 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25948-201ENSMUST00000175334 112 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25349-201ENSMUST00000177728 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm23616-201ENSMUST00000177797 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25871-201ENSMUST00000177816 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24752-201ENSMUST00000178240 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24496-201ENSMUST00000178287 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25649-201ENSMUST00000178476 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25548-201ENSMUST00000178681 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm23147-201ENSMUST00000178841 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm26095-201ENSMUST00000179270 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm22171-201ENSMUST00000179283 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm23936-201ENSMUST00000179354 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm22619-201ENSMUST00000179516 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25255-201ENSMUST00000179579 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24755-201ENSMUST00000179691 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm26506-201ENSMUST00000179692 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm25086-201ENSMUST00000179931 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm23243-201ENSMUST00000180047 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24659-201ENSMUST00000180212 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm24169-201ENSMUST00000180244 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm23689-201ENSMUST00000180354 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm27359-201ENSMUST00000184153 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm27785-201ENSMUST00000184268 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm27466-201ENSMUST00000184396 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm27703-201ENSMUST00000184836 110 ntBASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms